BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB025G04LP1|AL428434
(902 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1372 791 0.0
>3x_Contig1372
Length = 7292
Score = 791 bits (396), Expect = 0.0
Identities = 413/418 (98%), Gaps = 2/418 (0%)
Strand = Plus / Plus
Query: 1 gatctgggaatatttccctatacgaaaagtatgtcccgttcgggm-acttcctcgtgact 59
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 2134 gatctgggaatatttccctatacgaaaagtatgtcccgttcgggacacttcctcgtgact 2193
Query: 60 atgtctttttcgacaattttccaggccgtttcttggaaacagaatggaagtgcgaaacaa 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2194 atgtctttttcgacaattttccaggccgtttcttggaaacagaatggaagtgcgaaacaa 2253
Query: 120 aagggaaacagatgggaaatattatgaaaacccttgtttttccccgcaataatgtttcgt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2254 aagggaaacagatgggaaatattatgaaaacccttgtttttccccgcaataatgtttcgt 2313
Query: 180 ttttggagacggagacggagagaggagaaggcaacgatgccattgtcatcctggtctgtc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2314 ttttggagacggagacggagagaggagaaggcaacgatgccattgtcatcctggtctgtc 2373
Query: 240 attagcgtca-sracagaaaaagagaaacaagggggggggcggccatggtttttgtctgg 298
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2374 attagcgtcagcgacagaaaaagagaaacaagggggggggcggccatggtttttgtctgg 2433
Query: 299 taccatgcatcggattggttgatccgattgattcttgattgatttcgggtttaatcaaag 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2434 taccatgcatcggattggttgatccgattgattcttgattgatttcgggtttaatcaaag 2493
Query: 359 gacagaaaggctttgacatatttatcatttccatcgattattattatatttatatata 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2494 gacagaaaggctttgacatatttatcatttccatcgattattattatatttatatata 2551
Score = 641 bits (321), Expect = 0.0
Identities = 326/331 (98%)
Strand = Plus / Plus
Query: 572 tcttaaagggtcatatttgcttttactagtgattacagtcaagagtttggctacgggcaa 631
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2708 tcttaaagggtcatatttgcttttactagtgattacagtcaagagtttggctacgggcaa 2767
Query: 632 ggataagaacaatagagtggagaaaaaggaacatggtaaagattcccgccggaaagttag 691
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2768 ggataagaacaatagagtggagaaaaaggaacatggtaaagattcccgccggaaagttag 2827
Query: 692 aaggcataccgtctctaggaaactctctcatatgtcgttaaatcagctttcttctcgtgt 751
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2828 aaggcataccgtctctaggaaactctctcatatgtcgttaaatcagctttcttctcgtgt 2887
Query: 752 cactacagaagcggatagtgttgccgatgacggttctagttcgagcgataatgacgagty 811
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2888 cactacagaagcggatagtgttgccgatgacggttctagttcgagcgataatgacgagtc 2947
Query: 812 ctyttybaacgatgaaggktttgatttgaatgagaacctcatcaggcataagaagattag 871
|| || ||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 2948 ctcttcgaacgatgaaggttttgatttgaatgagaacctcatcaggcataagaagattag 3007
Query: 872 ccatatttccggaaacgatttgaagaaacag 902
|||||||||||||||||||||||||||||||
Sbjct: 3008 ccatatttccggaaacgatttgaagaaacag 3038
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.32
Gapped
Lambda K H
1.38 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9636
Number of Sequences: 1807
Number of extensions: 9636
Number of successful extensions: 777
Number of sequences better than 1.0e-20: 1
length of query: 902
length of database: 10,358,551
effective HSP length: 16
effective length of query: 886
effective length of database: 10,329,639
effective search space: 9152060154
effective search space used: 9152060154
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.3 bits)